Index

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__init__() (seqdata.BAM method) (seqdata.BigWig method) (seqdata.FlatFASTA method) (seqdata.GenomeFASTA method) (seqdata.Table method) (seqdata.VCF method)

A

add_bed_to_sdata() (in module seqdata)

B

BAM (class in seqdata)

BigWig (class in seqdata)

F

FlatFASTA (class in seqdata)

from_flat_files() (in module seqdata) from_region_files() (in module seqdata)

G

GenomeFASTA (class in seqdata)

get_torch_dataloader() (in module seqdata)

L

label_overlapping_regions() (in module seqdata)

M

merge_obs() (in module seqdata)

module seqdata

O

open_zarr() (in module seqdata)

R

read_bam() (in module seqdata) read_bedlike() (in module seqdata) read_bigwig() (in module seqdata)

read_flat_fasta() (in module seqdata) read_genome_fasta() (in module seqdata) read_table() (in module seqdata) read_vcf() (in module seqdata)

S

seqdata module

T

Table (class in seqdata)

to_zarr() (in module seqdata)

V

VCF (class in seqdata)